Picornaviridae
Study Group
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Unassigned types
Combining types
 

New Types

A proposal for the designation of RV-A types has been published (McIntyre et al., 2013).

Type Prototype strain CG acc. VP1 acc. VP4/VP2 acc. Proposed by Reference
HRV-A21 Hanks2102 - AY450462
AY355180		 AY040234   Laine et al, 2005
Ledford et al., 2004
Savolainen et al., 2002
HRV-A101 hrv-A101 GQ415051 - - Jennifer Rathe Rathe et al., 2010
  hrv-A101-v1 GQ415052 - -   Rathe et al., 2010
HRV-A102 AMS323 (Netherlands) EF155421 - -   de Vries et al., 2008
HRV-A103 WA327E/09 JF965515 - -   Chidlow et al., unpub.
HRV-A104 p1025_sR2625_2009
p1131_sR2052_2009
p1131_sR2053_2009		 JN562727
JX074047
JX193797		 -
-
-		 -
-
-		 McIntyre et al., 2013 Liggett et al., unpub.
Liggett et al., unpub.
Liggett et al., unpub.
HRV-A105 p1064_sR985_2009
p1105_sR2804_2008		 JN614995
JN990699 		-
-		 -
-		 McIntyre et al., 2013 Liggett et al., unpub.
Liggett et al., unpub.
HRV-A106 p1044_sR114_2008
p1047_sR141_2008		 JQ245971
JX025555		 -
-		 -
-		 McIntyre et al., 2013 Liggett et al., unpub.
Liggett et al., unpub.
HRV-A107 SO7259 - KC859319 JN855971 María Teresa Cuevas unpublished
HRV-A108 SO7696 - KC859318 JN855991 María Teresa Cuevas unpublished
HRV-A109 F0062-V1 - KP737114 KP736800 Kalina Zlateva unpublished
             

*, sequence of prototype strain
†, complete P1 sequence

References

Laine, P., Savolainen, C., Blomqvist, S. and Hovi, T. (2005). Phylogenetic analysis of human rhinovirus capsid protein VP1 and 2A protease coding sequences confirms shared genus-like relationships with human enteroviruses. J. Gen. Virol. 86: 697-706.
 
Ledford, R.M., Patel, N.R., Demenczuk, T.M., Watanyar, A., Herbertz, T., Collett, M.S. and Pevear, D.C.
(2004). VP1 sequencing of all human rhinovirus serotypes: insights into genus phylogeny and susceptibility to antiviral capsid-binding compounds. J. Virol. 78: 3663-3674.
 
McIntyre, C.L., Knowles, N.J. and Simmonds, P. (2013). Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J. Gen. Virol. 94: 1791-1806.
 
Savolainen, C., Blomqvist, S., Mulders, M.N. and Hovi, T. (2002). Genetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70. J. Gen. Virol. 83: 333-340.
 
Simmonds P, McIntyre C, Savolainen-Kopra C, Tapparel C, Mackay IM, Hovi T. (2010). Proposals for the classification of human rhinovirus species C into genotypically assigned types. J Gen Virol. 91: 2409-2419. Epub 2010 Jul 7.